CDS

Accession Number TCMCG081C08388
gbkey CDS
Protein Id XP_019075770.1
Location complement(join(5444415..5444651,5445421..5446872,5447507..5447680,5447787..5448557))
Gene LOC100247679
GeneID 100247679
Organism Vitis vinifera

Protein

Length 877aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_019220225.1
Definition PREDICTED: probable RNA helicase SDE3 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category L
Description RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K18422        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0002252        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009616        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035821        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0044003        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051607        [VIEW IN EMBL-EBI]
GO:0051701        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051817        [VIEW IN EMBL-EBI]
GO:0052018        [VIEW IN EMBL-EBI]
GO:0052249        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0098586        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTACTGGGTGGGATGATGAGTGCTCTGTCATTGGAGACAAAGGTGAAATTGGGTTTATTGATTTTGAGAATGATGCATCCGTGTGTGATTACAACCCGAGTGAAGAAGGTCCAGTTGTTGTTTCTGTCCCATTTGCCTTCAAAGGGAAGCCTAAATCAATATTCGTGGGGGAAACTGCTACTGACTGTGTAACCTTAGAGAACACCACTAGTGAACCTGTGGAACTCTGGGCAGTAAGAATATTTGCATCCACTCCTGAGGACTCATTCACAGTTTCTTTAATGGAACCACCATCAGCAGGTGTAGACATCAAATACATTCAAGAATTTCTGGAGTCTTTTTGCTTGGAAGACAGAGTGCTTCAGCCCGGGGAAACTTTGACTGTGTGGGTATCTTGCAAGCCAAAGGAAATTGGCCTGCACACATCGGTTGTGCACTTTGATTTGGGGTCAGACAGGATAGAGCGGGTGATTTTCCTTTTGGCTGAAGATAGGGTTTCACAATCTTTGGCCCCAAACAAGCCATATTCAAGAGGCTCAAGAAAGAAGGTGTTTAATGTGCAGGAATATGTTGTGGGTTCACGACCTGCAAGACCGAATACCCGAAGTTTCAGATATAGGCTTCCTCAATATGTAATTCCAAATGATGTTAGAGAATTAGTGGAGGGTAAGCAGATCCCTGATACCATCTTAGAAGGCCTAACAAGAGACAATTATGAATCTTACTTCAAAACTTTACTGATCATGGAAGAAATTCGCATGGAGGAAGACATGAGGAGCTATGACATGGAGCGTGTGACTATGAGGAGGAAGGGGACGCAATTCTTGACCCTTGAGGTCCCTGGCCTGGCTGAGAAAAGACCTTCACTTGTTCATGGGGATTACATTTTTGCCAAGCTTGCCTATGAAGATGAAAATGATTTGAGTCCTCCATATCAGGGTTTCATCCATCGTGTTGAGGCTGAACAGGTGTACTTGGGTTTTGCCAAAGAATTCATCTGGCATCATACGGATGAAAGTCTCTACAATGTAAGGTTCACTTACAATCGAGTGAATATGAGAAGATTATATCAGGCTATAGACTCTGCAAAAGGGTTAGAGATGGATCTCCTCTTTCCTTCTGATTCTAGAAGGAGACTGATCAAAGCAACTCACATGGTCCCTATATCTTTTAATCTCAATGAGGAGCAGATTTTTTCAATTAAAATGATACTTGGCTGCAGAGGGGCACCACCTTATGTGATCCATGGCCCTCCAGGTACAGGTAAGACTAAGACAATGGTGGAAGCAATCCTCCAGCTCTATTTGACTCAAAAGAATACTCGCATTCTAGTCTGTGCACCTTCAAATAGTGCTGCAGACCACTTATTAGAACGACTCCTTGCTGAGAAGGCTGTGGAAGTACAAGGGAATGAGATATTCAGACTAAATGCAACTTCTCGCCCTTATGAGGATATGAATCCTGACTTCATTCGTTTTTGCTTCTCTGAAGACTTGATCTTCAAGTGTCCTCCACTCAATGACCTCAAGCGCTATAGGATAATTATTTCAACTTACATGAGTGCCGCTCTCCTTTATGCAGAAGGTGTCAAGCGGAGCCACTTCTCTCACATTTTATTGGATGAGGCTGGCCAAGCTTCTGAGCCAGAAACGATGATTCCTCTATCCCACCTTTGCCAGAGGAAAACAGTTGTTGTTCTTGCTGGAGACCCAATGCAACTGGGTCCTGTAATTTACTCCAAAGATGCAGAGACCTACTGCTTGGGAAAATCATACTTGGAGAGGCTTTTTGAATGTGAGTTTTACCACAAGGAGGATGAAAACTATGTAACCAAATTAGTTAGAAACTACCGATGTCACCCAGAAATCCTACATCTTCCCTCACAGCTGTTTTATAAAGGGGAACTGATCCCGTGCAAAGATGATAAAAGTTCCTCCATGACTTGGGCTGAAATCCTTCCTAACAGGGACTTTCCTGTTCTTTTCATTGGCGTCCAAGGCTATGATGAAAGGGAAGGAAGCAACCCATCGTGGTTTAATAGGACTGAGGCAAGTAAGGTGGTGGAGATCATTAAGAAGCTTACTATAAGCCAGGATCTGAGAGAGGAAGATATTGGGGTAATAACACCATATAGGCAGCAGGTACTCAAATTAAAGAAGGCCCTGGAAGGTGTTGATATGCCTGCTATCAAGGTTGGCAGTGTTGAGCAATTTCAAGGACAAGAGAGGGAAGTTATTATTATATCTACCGTCCGATCAACAATTAAACACAATGAGTTTGACAAAAACCACTGTTTGGGATTTTTGAGCAATCCCAGAAGGTTTAATGTGGCTATTACCCGAGCTAAATCGTTGCTTATTATTATTGGAAATCCACACATTATCAGCAAGGATTTATATTGGAACAAGATTTTATGGCATTGCTCAGACAATGACTCCTACCAGGGCTGTGCTCTTCCTGAGAGGCAGGATTTTGTTGACAAGGAACCTGTGCAGTTCAGCTTCAACCATGAAGAAGAGAACCCTCAACCCTCCAATGAAGTTGAAAGGGGTGAAGAGCCCTTTCAAGCAGAAGAGATCCCTAAACCTGTTAAGGATGAAGCTGAATGGTCTGATGGTTGGAAGTAA
Protein:  
MAATGWDDECSVIGDKGEIGFIDFENDASVCDYNPSEEGPVVVSVPFAFKGKPKSIFVGETATDCVTLENTTSEPVELWAVRIFASTPEDSFTVSLMEPPSAGVDIKYIQEFLESFCLEDRVLQPGETLTVWVSCKPKEIGLHTSVVHFDLGSDRIERVIFLLAEDRVSQSLAPNKPYSRGSRKKVFNVQEYVVGSRPARPNTRSFRYRLPQYVIPNDVRELVEGKQIPDTILEGLTRDNYESYFKTLLIMEEIRMEEDMRSYDMERVTMRRKGTQFLTLEVPGLAEKRPSLVHGDYIFAKLAYEDENDLSPPYQGFIHRVEAEQVYLGFAKEFIWHHTDESLYNVRFTYNRVNMRRLYQAIDSAKGLEMDLLFPSDSRRRLIKATHMVPISFNLNEEQIFSIKMILGCRGAPPYVIHGPPGTGKTKTMVEAILQLYLTQKNTRILVCAPSNSAADHLLERLLAEKAVEVQGNEIFRLNATSRPYEDMNPDFIRFCFSEDLIFKCPPLNDLKRYRIIISTYMSAALLYAEGVKRSHFSHILLDEAGQASEPETMIPLSHLCQRKTVVVLAGDPMQLGPVIYSKDAETYCLGKSYLERLFECEFYHKEDENYVTKLVRNYRCHPEILHLPSQLFYKGELIPCKDDKSSSMTWAEILPNRDFPVLFIGVQGYDEREGSNPSWFNRTEASKVVEIIKKLTISQDLREEDIGVITPYRQQVLKLKKALEGVDMPAIKVGSVEQFQGQEREVIIISTVRSTIKHNEFDKNHCLGFLSNPRRFNVAITRAKSLLIIIGNPHIISKDLYWNKILWHCSDNDSYQGCALPERQDFVDKEPVQFSFNHEEENPQPSNEVERGEEPFQAEEIPKPVKDEAEWSDGWK